Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC1P29353 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 AC092437.1-201ENST00000624794 1048 ntBASIC18.97■□□□□ 0.63
SHC1P29353 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC1P29353 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC1P29353 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SHC1P29353 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.96■□□□□ 0.63
SHC1P29353 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.96■□□□□ 0.63
SHC1P29353 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 AC137761.2-201ENST00000561729 223 ntBASIC18.96■□□□□ 0.63
SHC1P29353 AC145350.3-201ENST00000569033 163 ntBASIC18.96■□□□□ 0.63
SHC1P29353 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.96■□□□□ 0.63
SHC1P29353 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.96■□□□□ 0.63
SHC1P29353 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.96■□□□□ 0.63
SHC1P29353 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SHC1P29353 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHC1P29353 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHC1P29353 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC1P29353 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC1P29353 SLC7A5P2-201ENST00000553010 536 ntBASIC18.95■□□□□ 0.62
SHC1P29353 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.95■□□□□ 0.62
SHC1P29353 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.95■□□□□ 0.62
SHC1P29353 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC1P29353 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
SHC1P29353 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
SHC1P29353 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SHC1P29353 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC1P29353 AC092667.1-201ENST00000434301 2586 ntBASIC18.94■□□□□ 0.62
SHC1P29353 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SHC1P29353 LINC01521-201ENST00000504184 1943 ntBASIC18.94■□□□□ 0.62
SHC1P29353 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.94■□□□□ 0.62
SHC1P29353 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC1P29353 UBE2DNL-204ENST00000602536 740 ntBASIC18.94■□□□□ 0.62
SHC1P29353 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC1P29353 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC1P29353 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC1P29353 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SHC1P29353 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC1P29353 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
SHC1P29353 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC1P29353 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.93■□□□□ 0.62
SHC1P29353 AL121603.2-201ENST00000557373 2117 ntBASIC18.93■□□□□ 0.62
SHC1P29353 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.93■□□□□ 0.62
SHC1P29353 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC1P29353 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC1P29353 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHC1P29353 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SHC1P29353 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC1P29353 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC1P29353 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC1P29353 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SHC1P29353 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC1P29353 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC1P29353 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC1P29353 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SHC1P29353 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms