Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.03■■□□□ 1.12
CHRNB2P17787 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
CHRNB2P17787 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.03■■□□□ 1.12
CHRNB2P17787 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.03■■□□□ 1.12
CHRNB2P17787 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.03■■□□□ 1.12
CHRNB2P17787 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CHRNB2P17787 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.03■■□□□ 1.12
CHRNB2P17787 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.03■■□□□ 1.12
CHRNB2P17787 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 AP005212.1-201ENST00000581547 1997 ntBASIC22.03■■□□□ 1.12
CHRNB2P17787 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNB2P17787 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.03■■□□□ 1.12
CHRNB2P17787 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.03■■□□□ 1.12
CHRNB2P17787 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CHRNB2P17787 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNB2P17787 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNB2P17787 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNB2P17787 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.02■■□□□ 1.12
CHRNB2P17787 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNB2P17787 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
CHRNB2P17787 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.01■■□□□ 1.11
CHRNB2P17787 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
CHRNB2P17787 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CHRNB2P17787 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.01■■□□□ 1.11
CHRNB2P17787 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.01■■□□□ 1.11
CHRNB2P17787 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.01■■□□□ 1.11
CHRNB2P17787 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CHRNB2P17787 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNB2P17787 BID-203ENST00000399765 1879 ntTSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CHRNB2P17787 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHRNB2P17787 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHRNB2P17787 AC027702.1-201ENST00000563810 1770 ntBASIC22■■□□□ 1.11
CHRNB2P17787 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22■■□□□ 1.11
CHRNB2P17787 AC097381.1-201ENST00000429019 1296 ntBASIC22■■□□□ 1.11
CHRNB2P17787 KRT18P20-201ENST00000548986 1279 ntBASIC22■■□□□ 1.11
CHRNB2P17787 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22■■□□□ 1.11
CHRNB2P17787 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 AC120498.10-201ENST00000621827 505 ntBASIC22■■□□□ 1.11
CHRNB2P17787 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
CHRNB2P17787 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHRNB2P17787 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHRNB2P17787 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22■■□□□ 1.11
CHRNB2P17787 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHRNB2P17787 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.99■■□□□ 1.11
CHRNB2P17787 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.99■■□□□ 1.11
CHRNB2P17787 AC245052.3-201ENST00000450182 901 ntBASIC21.99■■□□□ 1.11
CHRNB2P17787 AC087623.3-201ENST00000607047 1098 ntBASIC21.99■■□□□ 1.11
CHRNB2P17787 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.99■■□□□ 1.11
CHRNB2P17787 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNB2P17787 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.99■■□□□ 1.11
CHRNB2P17787 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRNB2P17787 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.98■■□□□ 1.11
CHRNB2P17787 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.98■■□□□ 1.11
CHRNB2P17787 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.98■■□□□ 1.11
CHRNB2P17787 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRNB2P17787 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRNB2P17787 MIR6821-201ENST00000617625 74 ntBASIC21.98■■□□□ 1.11
CHRNB2P17787 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.98■■□□□ 1.11
CHRNB2P17787 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 GABARAPL3-202ENST00000624044 1851 ntBASIC21.98■■□□□ 1.11
CHRNB2P17787 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNB2P17787 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CHRNB2P17787 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNB2P17787 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNB2P17787 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.97■■□□□ 1.11
CHRNB2P17787 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHRNB2P17787 FP700111.2-201ENST00000619190 1892 ntBASIC21.97■■□□□ 1.11
CHRNB2P17787 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms