Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43DP0DP04 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43DP0DP04 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43DP0DP04 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV3-43DP0DP04 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV3-43DP0DP04 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGHV3-43DP0DP04 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 AC008175.2-201ENST00000612840 297 ntBASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 AC121338.2-201ENST00000622535 1744 ntBASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 AP004607.4-201ENST00000530158 1459 ntBASIC17.17■□□□□ 0.34
IGHV3-43DP0DP04 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 AC006128.1-201ENST00000624704 1661 ntBASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.16■□□□□ 0.34
IGHV3-43DP0DP04 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV3-43DP0DP04 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
IGHV3-43DP0DP04 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
IGHV3-43DP0DP04 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms