Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CAPN1P07384 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPN1P07384 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 AC079140.4-201ENST00000507448 529 ntBASIC20.36■□□□□ 0.85
CAPN1P07384 RAP2CP1-201ENST00000605103 478 ntBASIC20.36■□□□□ 0.85
CAPN1P07384 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPN1P07384 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPN1P07384 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CAPN1P07384 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN1P07384 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPN1P07384 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.35■□□□□ 0.85
CAPN1P07384 KRT19P1-201ENST00000405746 1186 ntBASIC20.35■□□□□ 0.85
CAPN1P07384 AC016769.1-201ENST00000409132 1010 ntBASIC20.35■□□□□ 0.85
CAPN1P07384 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPN1P07384 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPN1P07384 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.35■□□□□ 0.85
CAPN1P07384 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPN1P07384 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN1P07384 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CAPN1P07384 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CAPN1P07384 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN1P07384 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CAPN1P07384 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CAPN1P07384 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CAPN1P07384 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CAPN1P07384 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.34■□□□□ 0.85
CAPN1P07384 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.34■□□□□ 0.85
CAPN1P07384 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN1P07384 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 AL157384.1-201ENST00000445995 2473 ntBASIC20.34■□□□□ 0.85
CAPN1P07384 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN1P07384 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CAPN1P07384 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CAPN1P07384 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.33■□□□□ 0.85
CAPN1P07384 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPN1P07384 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CAPN1P07384 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPN1P07384 CDCA4P2-201ENST00000441182 718 ntBASIC20.33■□□□□ 0.85
CAPN1P07384 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN1P07384 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.33■□□□□ 0.85
CAPN1P07384 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CAPN1P07384 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.33■□□□□ 0.85
CAPN1P07384 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN1P07384 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.33■□□□□ 0.84
CAPN1P07384 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.33■□□□□ 0.84
CAPN1P07384 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CAPN1P07384 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN1P07384 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN1P07384 ID1-201ENST00000376105 1233 ntBASIC20.32■□□□□ 0.84
CAPN1P07384 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 AC073111.5-205ENST00000641717 521 ntBASIC20.32■□□□□ 0.84
CAPN1P07384 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN1P07384 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms