Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HLA-DPB1P04440 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 AC003102.1-202ENST00000563394 1796 ntBASIC18.58■□□□□ 0.57
HLA-DPB1P04440 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPB1P04440 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 AC133561.4-201ENST00000566112 224 ntBASIC18.58■□□□□ 0.56
HLA-DPB1P04440 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 AC087239.1-201ENST00000622671 572 ntBASIC18.58■□□□□ 0.56
HLA-DPB1P04440 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPB1P04440 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 PLK5-205ENST00000642079 1969 ntBASIC18.57■□□□□ 0.56
HLA-DPB1P04440 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 MIR638-201ENST00000385237 100 ntBASIC18.57■□□□□ 0.56
HLA-DPB1P04440 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 AC027682.1-201ENST00000562846 899 ntBASIC18.57■□□□□ 0.56
HLA-DPB1P04440 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 AC005837.3-201ENST00000612163 286 ntBASIC18.57■□□□□ 0.56
HLA-DPB1P04440 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DPB1P04440 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 AL391422.3-201ENST00000603791 2761 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 MIR939-201ENST00000401314 82 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 SUDS3P1-201ENST00000505831 966 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 AP005435.1-201ENST00000529293 1178 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 AC142381.2-201ENST00000566120 298 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 AL136967.2-201ENST00000623968 743 ntBASIC18.56■□□□□ 0.56
HLA-DPB1P04440 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPB1P04440 AFG3L1P-217ENST00000557444 2447 ntBASIC18.55■□□□□ 0.56
HLA-DPB1P04440 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 AC010141.3-201ENST00000456659 717 ntBASIC18.55■□□□□ 0.56
HLA-DPB1P04440 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPB1P04440 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 PCDHAC2-203ENST00000615316 3011 ntBASIC18.54■□□□□ 0.56
HLA-DPB1P04440 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms