Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.35■□□□□ 0.69
OPN1SWP03999 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
OPN1SWP03999 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.35■□□□□ 0.69
OPN1SWP03999 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.35■□□□□ 0.69
OPN1SWP03999 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.35■□□□□ 0.69
OPN1SWP03999 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPN1SWP03999 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.34■□□□□ 0.69
OPN1SWP03999 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.34■□□□□ 0.69
OPN1SWP03999 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPN1SWP03999 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.34■□□□□ 0.69
OPN1SWP03999 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.34■□□□□ 0.69
OPN1SWP03999 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
OPN1SWP03999 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
OPN1SWP03999 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
OPN1SWP03999 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.33■□□□□ 0.69
OPN1SWP03999 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
OPN1SWP03999 AC007225.1-201ENST00000566331 1836 ntBASIC19.33■□□□□ 0.69
OPN1SWP03999 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
OPN1SWP03999 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
OPN1SWP03999 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.33■□□□□ 0.68
OPN1SWP03999 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.33■□□□□ 0.68
OPN1SWP03999 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.33■□□□□ 0.68
OPN1SWP03999 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
OPN1SWP03999 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
OPN1SWP03999 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPN1SWP03999 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPN1SWP03999 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
OPN1SWP03999 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.32■□□□□ 0.68
OPN1SWP03999 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.32■□□□□ 0.68
OPN1SWP03999 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
OPN1SWP03999 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
OPN1SWP03999 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
OPN1SWP03999 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.32■□□□□ 0.68
OPN1SWP03999 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.32■□□□□ 0.68
OPN1SWP03999 AF213884.3-201ENST00000563833 479 ntBASIC19.32■□□□□ 0.68
OPN1SWP03999 AC106739.1-201ENST00000617035 715 ntBASIC19.32■□□□□ 0.68
OPN1SWP03999 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
OPN1SWP03999 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPN1SWP03999 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.32■□□□□ 0.68
OPN1SWP03999 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
OPN1SWP03999 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
OPN1SWP03999 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
OPN1SWP03999 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.31■□□□□ 0.68
OPN1SWP03999 MIR572-201ENST00000384983 95 ntBASIC19.31■□□□□ 0.68
OPN1SWP03999 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.31■□□□□ 0.68
OPN1SWP03999 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.31■□□□□ 0.68
OPN1SWP03999 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.31■□□□□ 0.68
OPN1SWP03999 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
OPN1SWP03999 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
OPN1SWP03999 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
OPN1SWP03999 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
OPN1SWP03999 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.31■□□□□ 0.68
OPN1SWP03999 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
OPN1SWP03999 FP700111.2-201ENST00000619190 1892 ntBASIC19.31■□□□□ 0.68
OPN1SWP03999 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
OPN1SWP03999 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
OPN1SWP03999 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.3■□□□□ 0.68
OPN1SWP03999 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.3■□□□□ 0.68
OPN1SWP03999 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
OPN1SWP03999 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.3■□□□□ 0.68
OPN1SWP03999 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
OPN1SWP03999 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.3■□□□□ 0.68
OPN1SWP03999 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms