Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBC1P01850 AC068338.2-201ENST00000563278 1430 ntBASIC20.81■□□□□ 0.92
TRBC1P01850 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBC1P01850 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.81■□□□□ 0.92
TRBC1P01850 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBC1P01850 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.81■□□□□ 0.92
TRBC1P01850 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.81■□□□□ 0.92
TRBC1P01850 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBC1P01850 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRBC1P01850 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBC1P01850 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBC1P01850 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRBC1P01850 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 AL591742.1-201ENST00000604433 565 ntBASIC20.8■□□□□ 0.92
TRBC1P01850 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.8■□□□□ 0.92
TRBC1P01850 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRBC1P01850 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBC1P01850 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRBC1P01850 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBC1P01850 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBC1P01850 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 CROCCP5-201ENST00000436658 830 ntBASIC20.79■□□□□ 0.92
TRBC1P01850 AC090192.1-201ENST00000517740 490 ntBASIC20.79■□□□□ 0.92
TRBC1P01850 AL162412.1-201ENST00000567129 965 ntBASIC20.79■□□□□ 0.92
TRBC1P01850 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBC1P01850 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.79■□□□□ 0.92
TRBC1P01850 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.78■□□□□ 0.92
TRBC1P01850 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBC1P01850 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.78■□□□□ 0.92
TRBC1P01850 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRBC1P01850 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBC1P01850 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBC1P01850 AC005181.1-201ENST00000604782 1256 ntBASIC20.78■□□□□ 0.92
TRBC1P01850 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBC1P01850 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBC1P01850 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.77■□□□□ 0.92
TRBC1P01850 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.77■□□□□ 0.92
TRBC1P01850 MIR663A-201ENST00000385250 93 ntBASIC20.77■□□□□ 0.92
TRBC1P01850 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.77■□□□□ 0.92
TRBC1P01850 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.77■□□□□ 0.92
TRBC1P01850 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBC1P01850 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.77■□□□□ 0.91
TRBC1P01850 AC116050.2-201ENST00000612102 1779 ntBASIC20.77■□□□□ 0.91
TRBC1P01850 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBC1P01850 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBC1P01850 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 CYP2T1P-201ENST00000432607 1285 ntBASIC20.76■□□□□ 0.91
TRBC1P01850 CDV3P1-201ENST00000471403 739 ntBASIC20.76■□□□□ 0.91
TRBC1P01850 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.76■□□□□ 0.91
TRBC1P01850 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 AC005229.4-201ENST00000610085 2198 ntBASIC20.76■□□□□ 0.91
TRBC1P01850 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBC1P01850 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBC1P01850 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBC1P01850 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRBC1P01850 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRBC1P01850 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBC1P01850 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBC1P01850 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms