Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GGPS1O95749 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GGPS1O95749 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.35■■□□□ 1.33
GGPS1O95749 CYP2T3P-201ENST00000601990 817 ntBASIC23.35■■□□□ 1.33
GGPS1O95749 AC100791.3-201ENST00000617619 330 ntBASIC23.35■■□□□ 1.33
GGPS1O95749 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
GGPS1O95749 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.35■■□□□ 1.33
GGPS1O95749 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GGPS1O95749 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GGPS1O95749 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GGPS1O95749 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.34■■□□□ 1.33
GGPS1O95749 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.34■■□□□ 1.33
GGPS1O95749 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
GGPS1O95749 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.34■■□□□ 1.33
GGPS1O95749 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 AC007322.3-201ENST00000426526 701 ntBASIC23.34■■□□□ 1.33
GGPS1O95749 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.34■■□□□ 1.33
GGPS1O95749 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.34■■□□□ 1.33
GGPS1O95749 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
GGPS1O95749 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.34■■□□□ 1.33
GGPS1O95749 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.34■■□□□ 1.33
GGPS1O95749 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GGPS1O95749 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.33■■□□□ 1.33
GGPS1O95749 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GGPS1O95749 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
GGPS1O95749 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.33■■□□□ 1.33
GGPS1O95749 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GGPS1O95749 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GGPS1O95749 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GGPS1O95749 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.33■■□□□ 1.33
GGPS1O95749 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GGPS1O95749 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
GGPS1O95749 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
GGPS1O95749 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.32■■□□□ 1.32
GGPS1O95749 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.32■■□□□ 1.32
GGPS1O95749 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.32■■□□□ 1.32
GGPS1O95749 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.32■■□□□ 1.32
GGPS1O95749 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
GGPS1O95749 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
GGPS1O95749 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
GGPS1O95749 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
GGPS1O95749 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GGPS1O95749 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GGPS1O95749 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GGPS1O95749 MCRIP2P1-201ENST00000394346 511 ntBASIC23.31■■□□□ 1.32
GGPS1O95749 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.31■■□□□ 1.32
GGPS1O95749 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
GGPS1O95749 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.31■■□□□ 1.32
GGPS1O95749 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.31■■□□□ 1.32
GGPS1O95749 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.31■■□□□ 1.32
GGPS1O95749 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GGPS1O95749 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GGPS1O95749 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.31■■□□□ 1.32
GGPS1O95749 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.31■■□□□ 1.32
GGPS1O95749 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
GGPS1O95749 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
GGPS1O95749 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.3■■□□□ 1.32
GGPS1O95749 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
GGPS1O95749 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.3■■□□□ 1.32
GGPS1O95749 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.3■■□□□ 1.32
GGPS1O95749 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.3■■□□□ 1.32
GGPS1O95749 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.3■■□□□ 1.32
GGPS1O95749 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.3■■□□□ 1.32
GGPS1O95749 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.3■■□□□ 1.32
GGPS1O95749 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.3■■□□□ 1.32
GGPS1O95749 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.3■■□□□ 1.32
GGPS1O95749 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
GGPS1O95749 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
GGPS1O95749 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
GGPS1O95749 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GGPS1O95749 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
GGPS1O95749 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GGPS1O95749 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GGPS1O95749 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GGPS1O95749 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GGPS1O95749 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms