Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.33■□□□□ 0.85
CPNE6O95741 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.33■□□□□ 0.85
CPNE6O95741 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.33■□□□□ 0.85
CPNE6O95741 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE6O95741 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE6O95741 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CPNE6O95741 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CPNE6O95741 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE6O95741 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE6O95741 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CPNE6O95741 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE6O95741 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.33■□□□□ 0.84
CPNE6O95741 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 MKRN4P-201ENST00000444706 1521 ntBASIC20.32■□□□□ 0.84
CPNE6O95741 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPNE6O95741 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE6O95741 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 AC080038.3-201ENST00000623346 1952 ntBASIC20.32■□□□□ 0.84
CPNE6O95741 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPNE6O95741 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CPNE6O95741 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.32■□□□□ 0.84
CPNE6O95741 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE6O95741 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE6O95741 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE6O95741 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.32■□□□□ 0.84
CPNE6O95741 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE6O95741 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE6O95741 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE6O95741 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE6O95741 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE6O95741 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 TSPY20P-201ENST00000450910 630 ntBASIC20.31■□□□□ 0.84
CPNE6O95741 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE6O95741 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CPNE6O95741 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPNE6O95741 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE6O95741 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE6O95741 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CPNE6O95741 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE6O95741 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE6O95741 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 AL512625.2-201ENST00000417533 625 ntBASIC20.3■□□□□ 0.84
CPNE6O95741 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE6O95741 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE6O95741 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE6O95741 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE6O95741 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CPNE6O95741 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CPNE6O95741 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 FAM99A-202ENST00000538190 1989 ntBASIC20.29■□□□□ 0.84
CPNE6O95741 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE6O95741 MIPEPP3-201ENST00000412105 444 ntBASIC20.29■□□□□ 0.84
CPNE6O95741 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE6O95741 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE6O95741 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPNE6O95741 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE6O95741 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE6O95741 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CPNE6O95741 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE6O95741 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE6O95741 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms