Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.39■□□□□ 0.53
CNOT4O95628 CD99P1-205ENST00000527459 561 ntBASIC18.39■□□□□ 0.53
CNOT4O95628 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CNOT4O95628 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.39■□□□□ 0.53
CNOT4O95628 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.39■□□□□ 0.53
CNOT4O95628 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNOT4O95628 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT4O95628 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CNOT4O95628 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CNOT4O95628 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CNOT4O95628 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CNOT4O95628 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT4O95628 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT4O95628 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 AC244015.2-201ENST00000616358 1861 ntBASIC18.38■□□□□ 0.53
CNOT4O95628 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT4O95628 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.38■□□□□ 0.53
CNOT4O95628 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT4O95628 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT4O95628 AC133552.2-202ENST00000575694 574 ntBASIC18.38■□□□□ 0.53
CNOT4O95628 AL591742.1-201ENST00000604433 565 ntBASIC18.38■□□□□ 0.53
CNOT4O95628 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT4O95628 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT4O95628 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT4O95628 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNOT4O95628 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT4O95628 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNOT4O95628 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT4O95628 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.37■□□□□ 0.53
CNOT4O95628 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT4O95628 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT4O95628 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT4O95628 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT4O95628 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT4O95628 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT4O95628 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT4O95628 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT4O95628 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT4O95628 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT4O95628 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT4O95628 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT4O95628 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT4O95628 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT4O95628 AC068338.2-201ENST00000563278 1430 ntBASIC18.36■□□□□ 0.53
CNOT4O95628 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.36■□□□□ 0.53
CNOT4O95628 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT4O95628 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT4O95628 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CNOT4O95628 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT4O95628 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNOT4O95628 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.35■□□□□ 0.53
CNOT4O95628 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNOT4O95628 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNOT4O95628 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.35■□□□□ 0.53
CNOT4O95628 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.35■□□□□ 0.53
CNOT4O95628 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 AC069236.1-201ENST00000604339 616 ntBASIC18.35■□□□□ 0.53
CNOT4O95628 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CNOT4O95628 AL121832.2-201ENST00000610979 668 ntBASIC18.35■□□□□ 0.53
CNOT4O95628 OR10C1-204ENST00000622521 1039 ntBASIC18.35■□□□□ 0.53
CNOT4O95628 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT4O95628 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT4O95628 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT4O95628 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNOT4O95628 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT4O95628 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT4O95628 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms