Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSPG5O95196 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.26■■□□□ 1.15
CSPG5O95196 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CSPG5O95196 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSPG5O95196 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.26■■□□□ 1.15
CSPG5O95196 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.26■■□□□ 1.15
CSPG5O95196 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.26■■□□□ 1.15
CSPG5O95196 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CSPG5O95196 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSPG5O95196 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CSPG5O95196 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.26■■□□□ 1.15
CSPG5O95196 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.26■■□□□ 1.15
CSPG5O95196 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CSPG5O95196 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSPG5O95196 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSPG5O95196 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.25■■□□□ 1.15
CSPG5O95196 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSPG5O95196 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.25■■□□□ 1.15
CSPG5O95196 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.25■■□□□ 1.15
CSPG5O95196 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSPG5O95196 AC091799.1-201ENST00000422823 811 ntBASIC22.25■■□□□ 1.15
CSPG5O95196 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.25■■□□□ 1.15
CSPG5O95196 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSPG5O95196 SOX15-203ENST00000570788 1093 ntBASIC22.25■■□□□ 1.15
CSPG5O95196 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CSPG5O95196 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CSPG5O95196 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CSPG5O95196 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CSPG5O95196 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 MIR718-201ENST00000390190 70 ntBASIC22.24■■□□□ 1.15
CSPG5O95196 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.24■■□□□ 1.15
CSPG5O95196 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.24■■□□□ 1.15
CSPG5O95196 PNMA6B-201ENST00000538162 1200 ntBASIC22.24■■□□□ 1.15
CSPG5O95196 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.24■■□□□ 1.15
CSPG5O95196 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.24■■□□□ 1.15
CSPG5O95196 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CSPG5O95196 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSPG5O95196 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.24■■□□□ 1.15
CSPG5O95196 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSPG5O95196 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSPG5O95196 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CSPG5O95196 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSPG5O95196 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.23■■□□□ 1.15
CSPG5O95196 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSPG5O95196 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
CSPG5O95196 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSPG5O95196 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSPG5O95196 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.23■■□□□ 1.15
CSPG5O95196 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.23■■□□□ 1.15
CSPG5O95196 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.23■■□□□ 1.15
CSPG5O95196 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.23■■□□□ 1.15
CSPG5O95196 AC245052.3-201ENST00000450182 901 ntBASIC22.23■■□□□ 1.15
CSPG5O95196 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.23■■□□□ 1.15
CSPG5O95196 Z99916.2-201ENST00000604037 246 ntBASIC22.23■■□□□ 1.15
CSPG5O95196 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.23■■□□□ 1.15
CSPG5O95196 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.22■■□□□ 1.15
CSPG5O95196 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 CDV3P1-201ENST00000471403 739 ntBASIC22.22■■□□□ 1.15
CSPG5O95196 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.22■■□□□ 1.15
CSPG5O95196 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.22■■□□□ 1.15
CSPG5O95196 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CSPG5O95196 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.22■■□□□ 1.15
CSPG5O95196 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
CSPG5O95196 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CSPG5O95196 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSPG5O95196 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.21■■□□□ 1.15
CSPG5O95196 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 MIR4497-201ENST00000583208 89 ntBASIC22.21■■□□□ 1.15
CSPG5O95196 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.21■■□□□ 1.15
CSPG5O95196 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.21■■□□□ 1.15
CSPG5O95196 AL589743.5-201ENST00000616611 1050 ntBASIC22.21■■□□□ 1.15
CSPG5O95196 HLA-B-256ENST00000639848 1089 ntBASIC22.21■■□□□ 1.15
CSPG5O95196 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CSPG5O95196 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSPG5O95196 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CSPG5O95196 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
CSPG5O95196 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CSPG5O95196 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.2■■□□□ 1.14
CSPG5O95196 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms