Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH16O75309 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH16O75309 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH16O75309 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDH16O75309 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 SERBP1P1-201ENST00000396021 1160 ntBASIC20.92■□□□□ 0.94
CDH16O75309 SMUG1P1-201ENST00000590640 811 ntBASIC20.92■□□□□ 0.94
CDH16O75309 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH16O75309 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH16O75309 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDH16O75309 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH16O75309 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDH16O75309 AC099778.1-201ENST00000568593 1911 ntBASIC20.92■□□□□ 0.94
CDH16O75309 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH16O75309 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH16O75309 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH16O75309 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH16O75309 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH16O75309 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH16O75309 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH16O75309 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH16O75309 SYT6-210ENST00000641643 1587 ntBASIC20.91■□□□□ 0.94
CDH16O75309 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH16O75309 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH16O75309 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH16O75309 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH16O75309 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH16O75309 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH16O75309 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH16O75309 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH16O75309 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
CDH16O75309 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.9■□□□□ 0.94
CDH16O75309 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
CDH16O75309 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.9■□□□□ 0.94
CDH16O75309 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH16O75309 DUX4L19-201ENST00000557448 1267 ntBASIC20.9■□□□□ 0.94
CDH16O75309 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH16O75309 AL512631.2-201ENST00000604634 923 ntBASIC20.9■□□□□ 0.94
CDH16O75309 AC011298.3-201ENST00000615796 283 ntBASIC20.9■□□□□ 0.94
CDH16O75309 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH16O75309 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH16O75309 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH16O75309 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH16O75309 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH16O75309 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH16O75309 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH16O75309 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH16O75309 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH16O75309 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH16O75309 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH16O75309 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH16O75309 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH16O75309 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH16O75309 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH16O75309 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH16O75309 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH16O75309 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDH16O75309 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDH16O75309 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH16O75309 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH16O75309 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.88■□□□□ 0.93
CDH16O75309 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDH16O75309 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH16O75309 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH16O75309 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CDH16O75309 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH16O75309 BX005040.4-201ENST00000637145 1518 ntBASIC20.87■□□□□ 0.93
CDH16O75309 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms