Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC28.82■■■□□ 2.2
BRD4O60885 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC28.81■■■□□ 2.2
BRD4O60885 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
BRD4O60885 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
BRD4O60885 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
BRD4O60885 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
BRD4O60885 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC28.81■■■□□ 2.2
BRD4O60885 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
BRD4O60885 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
BRD4O60885 GAS7-202ENST00000396115 929 ntTSL 5 BASIC28.81■■■□□ 2.2
BRD4O60885 DUSP5P2-201ENST00000426873 1033 ntBASIC28.81■■■□□ 2.2
BRD4O60885 AC098590.1-201ENST00000468126 897 ntBASIC28.81■■■□□ 2.2
BRD4O60885 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC28.81■■■□□ 2.2
BRD4O60885 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
BRD4O60885 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
BRD4O60885 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
BRD4O60885 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC28.81■■■□□ 2.2
BRD4O60885 AC026310.3-201ENST00000625186 2373 ntBASIC28.8■■■□□ 2.2
BRD4O60885 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
BRD4O60885 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
BRD4O60885 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28.8■■■□□ 2.2
BRD4O60885 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.8■■■□□ 2.2
BRD4O60885 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC28.8■■■□□ 2.2
BRD4O60885 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
BRD4O60885 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
BRD4O60885 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
BRD4O60885 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
BRD4O60885 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
BRD4O60885 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC28.79■■■□□ 2.2
BRD4O60885 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.79■■■□□ 2.2
BRD4O60885 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
BRD4O60885 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC28.79■■■□□ 2.2
BRD4O60885 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
BRD4O60885 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
BRD4O60885 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
BRD4O60885 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
BRD4O60885 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
BRD4O60885 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
BRD4O60885 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
BRD4O60885 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC28.78■■■□□ 2.2
BRD4O60885 BET1L-207ENST00000529614 560 ntTSL 5 BASIC28.78■■■□□ 2.2
BRD4O60885 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC28.78■■■□□ 2.2
BRD4O60885 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC28.78■■■□□ 2.2
BRD4O60885 FAM21FP-204ENST00000608637 956 ntBASIC28.78■■■□□ 2.2
BRD4O60885 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
BRD4O60885 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
BRD4O60885 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
BRD4O60885 MFF-203ENST00000349901 1716 ntTSL 2 BASIC28.78■■■□□ 2.2
BRD4O60885 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC28.78■■■□□ 2.2
BRD4O60885 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.78■■■□□ 2.2
BRD4O60885 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC28.78■■■□□ 2.2
BRD4O60885 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
BRD4O60885 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
BRD4O60885 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC28.77■■■□□ 2.2
BRD4O60885 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.77■■■□□ 2.2
BRD4O60885 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.77■■■□□ 2.2
BRD4O60885 AC100791.3-201ENST00000617619 330 ntBASIC28.77■■■□□ 2.2
BRD4O60885 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
BRD4O60885 AC061975.6-201ENST00000579045 1553 ntBASIC28.77■■■□□ 2.2
BRD4O60885 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
BRD4O60885 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
BRD4O60885 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
BRD4O60885 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
BRD4O60885 Z98882.1-201ENST00000622160 2253 ntBASIC28.76■■■□□ 2.2
BRD4O60885 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
BRD4O60885 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
BRD4O60885 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
BRD4O60885 GCSHP5-201ENST00000443090 522 ntBASIC28.76■■■□□ 2.2
BRD4O60885 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.2
BRD4O60885 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.76■■■□□ 2.2
BRD4O60885 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.76■■■□□ 2.2
BRD4O60885 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
BRD4O60885 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC28.76■■■□□ 2.19
BRD4O60885 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
BRD4O60885 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
BRD4O60885 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
BRD4O60885 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
BRD4O60885 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
BRD4O60885 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
BRD4O60885 ESRRAP1-201ENST00000400596 1257 ntBASIC28.75■■■□□ 2.19
BRD4O60885 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC28.75■■■□□ 2.19
BRD4O60885 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
BRD4O60885 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.75■■■□□ 2.19
BRD4O60885 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
BRD4O60885 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
BRD4O60885 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
BRD4O60885 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
BRD4O60885 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
BRD4O60885 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
BRD4O60885 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
BRD4O60885 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
BRD4O60885 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
BRD4O60885 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC28.74■■■□□ 2.19
BRD4O60885 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
BRD4O60885 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
BRD4O60885 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
BRD4O60885 INO80E-214ENST00000620599 515 ntTSL 2 BASIC28.74■■■□□ 2.19
BRD4O60885 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC28.73■■■□□ 2.19
BRD4O60885 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
BRD4O60885 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms