Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.57■■□□□ 1.36
CCNT1O60563 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.57■■□□□ 1.36
CCNT1O60563 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
CCNT1O60563 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCNT1O60563 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CCNT1O60563 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.56■■□□□ 1.36
CCNT1O60563 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.56■■□□□ 1.36
CCNT1O60563 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 AC091799.1-201ENST00000422823 811 ntBASIC23.56■■□□□ 1.36
CCNT1O60563 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.56■■□□□ 1.36
CCNT1O60563 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.56■■□□□ 1.36
CCNT1O60563 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.56■■□□□ 1.36
CCNT1O60563 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCNT1O60563 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.55■■□□□ 1.36
CCNT1O60563 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.55■■□□□ 1.36
CCNT1O60563 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CCNT1O60563 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.55■■□□□ 1.36
CCNT1O60563 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCNT1O60563 AC013268.1-206ENST00000638368 961 ntBASIC23.55■■□□□ 1.36
CCNT1O60563 AC112229.1-201ENST00000639295 961 ntBASIC23.55■■□□□ 1.36
CCNT1O60563 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CCNT1O60563 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCNT1O60563 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCNT1O60563 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CCNT1O60563 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.54■■□□□ 1.36
CCNT1O60563 CNN2P6-201ENST00000439038 900 ntBASIC23.54■■□□□ 1.36
CCNT1O60563 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCNT1O60563 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.54■■□□□ 1.36
CCNT1O60563 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.54■■□□□ 1.36
CCNT1O60563 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.54■■□□□ 1.36
CCNT1O60563 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.54■■□□□ 1.36
CCNT1O60563 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCNT1O60563 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCNT1O60563 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.54■■□□□ 1.36
CCNT1O60563 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CCNT1O60563 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
CCNT1O60563 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.53■■□□□ 1.36
CCNT1O60563 AC073111.5-205ENST00000641717 521 ntBASIC23.53■■□□□ 1.36
CCNT1O60563 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCNT1O60563 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CCNT1O60563 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.52■■□□□ 1.36
CCNT1O60563 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CCNT1O60563 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNT1O60563 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNT1O60563 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNT1O60563 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.52■■□□□ 1.36
CCNT1O60563 AC121338.2-201ENST00000622535 1744 ntBASIC23.52■■□□□ 1.36
CCNT1O60563 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCNT1O60563 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.52■■□□□ 1.36
CCNT1O60563 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.52■■□□□ 1.36
CCNT1O60563 PLK5-205ENST00000642079 1969 ntBASIC23.51■■□□□ 1.35
CCNT1O60563 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CCNT1O60563 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 CDCA4P2-201ENST00000441182 718 ntBASIC23.51■■□□□ 1.35
CCNT1O60563 AC231657.2-201ENST00000624556 255 ntBASIC23.51■■□□□ 1.35
CCNT1O60563 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CCNT1O60563 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CCNT1O60563 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
CCNT1O60563 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCNT1O60563 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNT1O60563 AC116050.2-201ENST00000612102 1779 ntBASIC23.5■■□□□ 1.35
CCNT1O60563 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNT1O60563 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.5■■□□□ 1.35
CCNT1O60563 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCNT1O60563 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCNT1O60563 AC007322.1-201ENST00000426983 750 ntBASIC23.5■■□□□ 1.35
CCNT1O60563 AC007322.4-201ENST00000509611 723 ntBASIC23.5■■□□□ 1.35
CCNT1O60563 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.5■■□□□ 1.35
CCNT1O60563 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms