Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.6■□□□□ 0.57
CXCL13O43927 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.6■□□□□ 0.57
CXCL13O43927 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.6■□□□□ 0.57
CXCL13O43927 AL024507.2-201ENST00000606070 2574 ntBASIC18.6■□□□□ 0.57
CXCL13O43927 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCL13O43927 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.59■□□□□ 0.57
CXCL13O43927 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.59■□□□□ 0.57
CXCL13O43927 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CXCL13O43927 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.59■□□□□ 0.57
CXCL13O43927 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.59■□□□□ 0.57
CXCL13O43927 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCL13O43927 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCL13O43927 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CXCL13O43927 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL13O43927 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCL13O43927 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCL13O43927 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CXCL13O43927 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CXCL13O43927 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CXCL13O43927 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CXCL13O43927 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CXCL13O43927 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.58■□□□□ 0.57
CXCL13O43927 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CXCL13O43927 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CXCL13O43927 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CXCL13O43927 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.58■□□□□ 0.56
CXCL13O43927 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.58■□□□□ 0.56
CXCL13O43927 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CXCL13O43927 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.58■□□□□ 0.56
CXCL13O43927 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CXCL13O43927 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.57■□□□□ 0.56
CXCL13O43927 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CXCL13O43927 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CXCL13O43927 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXCL13O43927 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.57■□□□□ 0.56
CXCL13O43927 NCF1B-203ENST00000435988 1254 ntBASIC18.57■□□□□ 0.56
CXCL13O43927 AC016405.3-201ENST00000607710 860 ntBASIC18.57■□□□□ 0.56
CXCL13O43927 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.57■□□□□ 0.56
CXCL13O43927 AC008694.1-202ENST00000636953 945 ntBASIC18.57■□□□□ 0.56
CXCL13O43927 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CXCL13O43927 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXCL13O43927 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXCL13O43927 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.57■□□□□ 0.56
CXCL13O43927 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCL13O43927 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CXCL13O43927 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CXCL13O43927 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CXCL13O43927 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCL13O43927 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.56■□□□□ 0.56
CXCL13O43927 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCL13O43927 CDV3P1-201ENST00000471403 739 ntBASIC18.56■□□□□ 0.56
CXCL13O43927 AC069236.1-201ENST00000604339 616 ntBASIC18.56■□□□□ 0.56
CXCL13O43927 AL121832.2-201ENST00000610979 668 ntBASIC18.56■□□□□ 0.56
CXCL13O43927 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCL13O43927 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.56■□□□□ 0.56
CXCL13O43927 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CXCL13O43927 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCL13O43927 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCL13O43927 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCL13O43927 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CXCL13O43927 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXCL13O43927 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
CXCL13O43927 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CXCL13O43927 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CXCL13O43927 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.55■□□□□ 0.56
CXCL13O43927 FEM1AP4-201ENST00000443167 1987 ntBASIC18.55■□□□□ 0.56
CXCL13O43927 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CXCL13O43927 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.55■□□□□ 0.56
CXCL13O43927 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCL13O43927 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCL13O43927 ID1-201ENST00000376105 1233 ntBASIC18.55■□□□□ 0.56
CXCL13O43927 GPX1P1-201ENST00000388829 606 ntBASIC18.55■□□□□ 0.56
CXCL13O43927 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.55■□□□□ 0.56
CXCL13O43927 AC083906.2-201ENST00000511578 360 ntBASIC18.55■□□□□ 0.56
CXCL13O43927 AF201337.1-201ENST00000520239 748 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms