Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.96■□□□□ 0.79
PRICKLE3O43900 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PRICKLE3O43900 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.96■□□□□ 0.79
PRICKLE3O43900 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 AC016405.3-201ENST00000607710 860 ntBASIC19.96■□□□□ 0.79
PRICKLE3O43900 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.96■□□□□ 0.79
PRICKLE3O43900 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PRICKLE3O43900 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.96■□□□□ 0.79
PRICKLE3O43900 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE3O43900 AC007375.3-201ENST00000600936 2314 ntBASIC19.96■□□□□ 0.79
PRICKLE3O43900 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE3O43900 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE3O43900 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.95■□□□□ 0.78
PRICKLE3O43900 MIR663A-201ENST00000385250 93 ntBASIC19.95■□□□□ 0.78
PRICKLE3O43900 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.95■□□□□ 0.78
PRICKLE3O43900 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE3O43900 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.95■□□□□ 0.78
PRICKLE3O43900 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE3O43900 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE3O43900 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PRICKLE3O43900 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE3O43900 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE3O43900 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE3O43900 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE3O43900 AC116050.2-201ENST00000612102 1779 ntBASIC19.94■□□□□ 0.78
PRICKLE3O43900 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE3O43900 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE3O43900 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 CYP2T1P-201ENST00000432607 1285 ntBASIC19.94■□□□□ 0.78
PRICKLE3O43900 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 AC133552.2-202ENST00000575694 574 ntBASIC19.94■□□□□ 0.78
PRICKLE3O43900 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 FAM21FP-204ENST00000608637 956 ntBASIC19.94■□□□□ 0.78
PRICKLE3O43900 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE3O43900 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE3O43900 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PRICKLE3O43900 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE3O43900 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE3O43900 NCF1B-203ENST00000435988 1254 ntBASIC19.93■□□□□ 0.78
PRICKLE3O43900 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE3O43900 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE3O43900 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.93■□□□□ 0.78
PRICKLE3O43900 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE3O43900 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 AC007322.3-201ENST00000426526 701 ntBASIC19.92■□□□□ 0.78
PRICKLE3O43900 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.92■□□□□ 0.78
PRICKLE3O43900 CDV3P1-201ENST00000471403 739 ntBASIC19.92■□□□□ 0.78
PRICKLE3O43900 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.92■□□□□ 0.78
PRICKLE3O43900 RARRES2P4-201ENST00000514074 484 ntBASIC19.92■□□□□ 0.78
PRICKLE3O43900 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.92■□□□□ 0.78
PRICKLE3O43900 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRICKLE3O43900 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRICKLE3O43900 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE3O43900 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 AC006970.2-201ENST00000450065 779 ntBASIC19.91■□□□□ 0.78
PRICKLE3O43900 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 OR10C1-204ENST00000622521 1039 ntBASIC19.91■□□□□ 0.78
PRICKLE3O43900 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms