Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHDO14521 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHDO14521 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
SDHDO14521 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SDHDO14521 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.03■□□□□ 0.8
SDHDO14521 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SDHDO14521 UNC93B3-201ENST00000308076 687 ntBASIC20.03■□□□□ 0.8
SDHDO14521 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SDHDO14521 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.03■□□□□ 0.8
SDHDO14521 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SDHDO14521 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.03■□□□□ 0.8
SDHDO14521 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SDHDO14521 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SDHDO14521 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SDHDO14521 AC011484.1-201ENST00000377652 1995 ntBASIC20.03■□□□□ 0.8
SDHDO14521 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHDO14521 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHDO14521 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHDO14521 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHDO14521 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.02■□□□□ 0.8
SDHDO14521 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SDHDO14521 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHDO14521 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHDO14521 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SDHDO14521 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHDO14521 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.02■□□□□ 0.79
SDHDO14521 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHDO14521 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHDO14521 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHDO14521 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.02■□□□□ 0.79
SDHDO14521 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SDHDO14521 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SDHDO14521 AL136116.3-201ENST00000402907 1138 ntBASIC20.01■□□□□ 0.79
SDHDO14521 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.01■□□□□ 0.79
SDHDO14521 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.01■□□□□ 0.79
SDHDO14521 AC024257.2-201ENST00000549699 147 ntBASIC20.01■□□□□ 0.79
SDHDO14521 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 AC105233.4-201ENST00000642045 216 ntBASIC20.01■□□□□ 0.79
SDHDO14521 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.01■□□□□ 0.79
SDHDO14521 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHDO14521 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20■□□□□ 0.79
SDHDO14521 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDHDO14521 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SDHDO14521 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHDO14521 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20■□□□□ 0.79
SDHDO14521 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SDHDO14521 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDHDO14521 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20■□□□□ 0.79
SDHDO14521 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20■□□□□ 0.79
SDHDO14521 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20■□□□□ 0.79
SDHDO14521 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20■□□□□ 0.79
SDHDO14521 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20■□□□□ 0.79
SDHDO14521 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20■□□□□ 0.79
SDHDO14521 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SDHDO14521 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20■□□□□ 0.79
SDHDO14521 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20■□□□□ 0.79
SDHDO14521 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20■□□□□ 0.79
SDHDO14521 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SDHDO14521 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20■□□□□ 0.79
SDHDO14521 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20■□□□□ 0.79
SDHDO14521 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHDO14521 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SDHDO14521 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SDHDO14521 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.99■□□□□ 0.79
SDHDO14521 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.99■□□□□ 0.79
SDHDO14521 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SDHDO14521 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms