Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
H3BM21 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
H3BM21 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.65■□□□□ 0.9
H3BM21 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 RBM17P2-201ENST00000616397 1405 ntBASIC20.65■□□□□ 0.9
H3BM21 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
H3BM21 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
H3BM21 MIPEPP3-201ENST00000412105 444 ntBASIC20.65■□□□□ 0.9
H3BM21 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.65■□□□□ 0.9
H3BM21 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.65■□□□□ 0.9
H3BM21 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
H3BM21 AL591742.1-201ENST00000604433 565 ntBASIC20.65■□□□□ 0.9
H3BM21 AC016405.3-201ENST00000607710 860 ntBASIC20.65■□□□□ 0.9
H3BM21 AC243732.1-201ENST00000612648 864 ntBASIC20.65■□□□□ 0.9
H3BM21 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.65■□□□□ 0.9
H3BM21 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
H3BM21 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
H3BM21 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
H3BM21 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H3BM21 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
H3BM21 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.64■□□□□ 0.9
H3BM21 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
H3BM21 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
H3BM21 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.64■□□□□ 0.89
H3BM21 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.64■□□□□ 0.89
H3BM21 TSPY20P-201ENST00000450910 630 ntBASIC20.64■□□□□ 0.89
H3BM21 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.64■□□□□ 0.89
H3BM21 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.64■□□□□ 0.89
H3BM21 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3BM21 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.63■□□□□ 0.89
H3BM21 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.63■□□□□ 0.89
H3BM21 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
H3BM21 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.63■□□□□ 0.89
H3BM21 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.63■□□□□ 0.89
H3BM21 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.63■□□□□ 0.89
H3BM21 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.63■□□□□ 0.89
H3BM21 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.63■□□□□ 0.89
H3BM21 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3BM21 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.62■□□□□ 0.89
H3BM21 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.62■□□□□ 0.89
H3BM21 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.62■□□□□ 0.89
H3BM21 AC098934.4-201ENST00000564127 592 ntBASIC20.62■□□□□ 0.89
H3BM21 AC092118.2-201ENST00000613495 667 ntBASIC20.62■□□□□ 0.89
H3BM21 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.62■□□□□ 0.89
H3BM21 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.62■□□□□ 0.89
H3BM21 AC061975.6-201ENST00000579045 1553 ntBASIC20.62■□□□□ 0.89
H3BM21 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
H3BM21 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
H3BM21 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
H3BM21 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3BM21 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
H3BM21 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.61■□□□□ 0.89
H3BM21 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 AC093787.1-201ENST00000450396 207 ntBASIC20.61■□□□□ 0.89
H3BM21 FAM201B-201ENST00000458407 597 ntBASIC20.61■□□□□ 0.89
H3BM21 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.61■□□□□ 0.89
H3BM21 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.61■□□□□ 0.89
H3BM21 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.61■□□□□ 0.89
H3BM21 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.61■□□□□ 0.89
H3BM21 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.61■□□□□ 0.89
H3BM21 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
H3BM21 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms