Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPIPA3F8WFD2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 AC244015.2-201ENST00000616358 1861 ntBASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 AC016405.3-201ENST00000607710 860 ntBASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 OR10C1-204ENST00000622521 1039 ntBASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.89■□□□□ 0.61
NPIPA3F8WFD2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 AC098934.4-201ENST00000564127 592 ntBASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA3F8WFD2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 MIPEPP3-201ENST00000412105 444 ntBASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 AC093787.1-201ENST00000450396 207 ntBASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 MIR4758-201ENST00000577688 71 ntBASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 RBM17P2-201ENST00000616397 1405 ntBASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA3F8WFD2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 TSPY20P-201ENST00000450910 630 ntBASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA3F8WFD2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 AL591742.1-201ENST00000604433 565 ntBASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA3F8WFD2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 AL512625.2-201ENST00000417533 625 ntBASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 AC073210.2-201ENST00000430369 194 ntBASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA3F8WFD2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms