Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 TERF1P1-201ENST00000311003 1181 ntBASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 AL137013.1-201ENST00000432946 1228 ntBASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
C1QTNF9BB2RNN3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 UPK3BP1-201ENST00000428678 509 ntBASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 KRT126P-201ENST00000549467 1181 ntBASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C1QTNF9BB2RNN3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C1QTNF9BB2RNN3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 LINC01568-207ENST00000641790 1380 ntBASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 AC104076.2-201ENST00000448912 469 ntBASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 AC006557.6-201ENST00000623071 864 ntBASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 LINC01124-201ENST00000409786 2117 ntBASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
C1QTNF9BB2RNN3 LINC00526-201ENST00000581067 1875 ntBASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 AC120498.8-201ENST00000614275 531 ntBASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C1QTNF9BB2RNN3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.59■□□□□ 0.73
C1QTNF9BB2RNN3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF9BB2RNN3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF9BB2RNN3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms