Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.35■■□□□ 1.17
LRRC53A6NM62 FP700111.2-201ENST00000619190 1892 ntBASIC22.35■■□□□ 1.17
LRRC53A6NM62 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC53A6NM62 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC53A6NM62 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.35■■□□□ 1.17
LRRC53A6NM62 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC53A6NM62 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC53A6NM62 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.35■■□□□ 1.17
LRRC53A6NM62 AC020907.5-201ENST00000624372 1936 ntBASIC22.35■■□□□ 1.17
LRRC53A6NM62 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 AL139246.5-201ENST00000606645 996 ntBASIC22.34■■□□□ 1.17
LRRC53A6NM62 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC53A6NM62 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRC53A6NM62 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.33■■□□□ 1.17
LRRC53A6NM62 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.33■■□□□ 1.17
LRRC53A6NM62 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
LRRC53A6NM62 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
LRRC53A6NM62 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.33■■□□□ 1.17
LRRC53A6NM62 AC011484.1-201ENST00000377652 1995 ntBASIC22.33■■□□□ 1.17
LRRC53A6NM62 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC53A6NM62 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC53A6NM62 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC53A6NM62 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC53A6NM62 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
LRRC53A6NM62 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 AL358852.1-201ENST00000623174 1268 ntBASIC22.32■■□□□ 1.16
LRRC53A6NM62 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
LRRC53A6NM62 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC53A6NM62 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
LRRC53A6NM62 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.31■■□□□ 1.16
LRRC53A6NM62 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.31■■□□□ 1.16
LRRC53A6NM62 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC53A6NM62 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC53A6NM62 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC53A6NM62 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC53A6NM62 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 AC079140.4-201ENST00000507448 529 ntBASIC22.3■■□□□ 1.16
LRRC53A6NM62 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC53A6NM62 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC53A6NM62 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.3■■□□□ 1.16
LRRC53A6NM62 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC53A6NM62 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms