Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
HFM1A2PYH4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
HFM1A2PYH4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
HFM1A2PYH4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
HFM1A2PYH4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
HFM1A2PYH4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.88■■■□□ 2.53
HFM1A2PYH4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 MIR4758-201ENST00000577688 71 ntBASIC30.87■■■□□ 2.53
HFM1A2PYH4 AC133041.1-202ENST00000642053 222 ntBASIC30.87■■■□□ 2.53
HFM1A2PYH4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
HFM1A2PYH4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC30.87■■■□□ 2.53
HFM1A2PYH4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 MCRIP2P1-201ENST00000394346 511 ntBASIC30.86■■■□□ 2.53
HFM1A2PYH4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.86■■■□□ 2.53
HFM1A2PYH4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC30.86■■■□□ 2.53
HFM1A2PYH4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
HFM1A2PYH4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
HFM1A2PYH4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HFM1A2PYH4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.85■■■□□ 2.53
HFM1A2PYH4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HFM1A2PYH4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC30.85■■■□□ 2.53
HFM1A2PYH4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HFM1A2PYH4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
HFM1A2PYH4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
HFM1A2PYH4 AL355472.2-201ENST00000422958 438 ntBASIC30.85■■■□□ 2.53
HFM1A2PYH4 FEM1AP4-201ENST00000443167 1987 ntBASIC30.85■■■□□ 2.53
HFM1A2PYH4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HFM1A2PYH4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
HFM1A2PYH4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC30.85■■■□□ 2.53
HFM1A2PYH4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.85■■■□□ 2.53
HFM1A2PYH4 AC087633.2-202ENST00000565166 1439 ntBASIC30.85■■■□□ 2.53
HFM1A2PYH4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HFM1A2PYH4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
HFM1A2PYH4 AL049796.1-201ENST00000565336 1766 ntBASIC30.84■■■□□ 2.53
HFM1A2PYH4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.84■■■□□ 2.53
HFM1A2PYH4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC30.84■■■□□ 2.53
HFM1A2PYH4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
HFM1A2PYH4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HFM1A2PYH4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HFM1A2PYH4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
HFM1A2PYH4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HFM1A2PYH4 WWC2-AS2-201ENST00000578387 2183 ntBASIC30.84■■■□□ 2.53
HFM1A2PYH4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.83■■■□□ 2.53
HFM1A2PYH4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.83■■■□□ 2.53
HFM1A2PYH4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC30.83■■■□□ 2.53
HFM1A2PYH4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
HFM1A2PYH4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
HFM1A2PYH4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HFM1A2PYH4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HFM1A2PYH4 DUSP5P2-201ENST00000426873 1033 ntBASIC30.82■■■□□ 2.52
HFM1A2PYH4 AC091874.3-201ENST00000512672 1195 ntBASIC30.82■■■□□ 2.52
HFM1A2PYH4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.82■■■□□ 2.52
HFM1A2PYH4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC30.82■■■□□ 2.52
HFM1A2PYH4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HFM1A2PYH4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
HFM1A2PYH4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC30.82■■■□□ 2.52
HFM1A2PYH4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC30.82■■■□□ 2.52
HFM1A2PYH4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms