Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AP001160.3-201ENST00000601484 763 ntBASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SLC25A24-204ENST00000569674 2357 ntBASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC055733.4-201ENST00000638462 1354 ntBASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 HLA-L-209ENST00000420110 1011 ntBASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV4S1A1TA0A5B7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV4S1A1TA0A5B7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RAP2CP1-201ENST00000605103 478 ntBASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 UBE2DNL-204ENST00000602536 740 ntBASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV4S1A1TA0A5B7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms