Protein–RNA interactions for Protein: A0A0C4DH73

IGKV1-12, Immunoglobulin kappa variable 1-12, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-12A0A0C4DH73 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV1-12A0A0C4DH73 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.59■□□□□ 0.41
IGKV1-12A0A0C4DH73 AC008175.2-201ENST00000612840 297 ntBASIC17.59■□□□□ 0.41
IGKV1-12A0A0C4DH73 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV1-12A0A0C4DH73 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV1-12A0A0C4DH73 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
IGKV1-12A0A0C4DH73 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGKV1-12A0A0C4DH73 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGKV1-12A0A0C4DH73 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGKV1-12A0A0C4DH73 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGKV1-12A0A0C4DH73 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV1-12A0A0C4DH73 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 LINC02228-203ENST00000641970 1355 ntBASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 FP700111.2-201ENST00000619190 1892 ntBASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 RARRES2P11-201ENST00000635158 484 ntBASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV1-12A0A0C4DH73 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.56■□□□□ 0.4
IGKV1-12A0A0C4DH73 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 AC010141.2-201ENST00000452426 721 ntBASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 AC020907.5-201ENST00000624372 1936 ntBASIC17.55■□□□□ 0.4
IGKV1-12A0A0C4DH73 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
IGKV1-12A0A0C4DH73 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms