Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 SYT6-210ENST00000641643 1587 ntBASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV13-1A0A0B4J241 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRAV13-1A0A0B4J241 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRAV13-1A0A0B4J241 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRAV13-1A0A0B4J241 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 AC006128.1-201ENST00000624704 1661 ntBASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 AP006587.3-201ENST00000525742 1516 ntBASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV13-1A0A0B4J241 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV13-1A0A0B4J241 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms