Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 TEX47-201ENST00000297203 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 OR6Q1-201ENST00000302622 1002 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SLC1A1P43005 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 RAB18-202ENST00000375802 617 ntTSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 GAS5-224ENST00000454068 688 ntTSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 LINC00370-201ENST00000455487 698 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 RNU7-92P-201ENST00000458830 76 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 RNU7-173P-201ENST00000458903 76 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 RNA5SP409-201ENST00000516815 109 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 AC090568.2-201ENST00000523254 497 ntTSL 4 BASIC10.28□□□□□ -0.76
SLC1A1P43005 AP002840.1-201ENST00000546284 524 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 AC073655.2-201ENST00000551941 796 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 LINC01579-203ENST00000555023 400 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 CMC2-207ENST00000564174 424 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 NDUFB10P2-201ENST00000568872 478 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 MIR4269-201ENST00000578705 84 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 AP001029.2-201ENST00000586591 361 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 AC024075.1-201ENST00000596816 546 ntTSL 4 BASIC10.28□□□□□ -0.76
SLC1A1P43005 FAM197Y2-203ENST00000598351 776 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 AL359091.3-201ENST00000609315 573 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 SVIL-AS1-211ENST00000609413 566 ntTSL 4 BASIC10.28□□□□□ -0.76
SLC1A1P43005 TP53TG1-206ENST00000610086 849 ntTSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 AC124076.1-201ENST00000611470 608 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 TRPC5OS-202ENST00000612026 1043 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
SLC1A1P43005 AL627230.8-201ENST00000613335 202 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 HP-218ENST00000613898 1107 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 AC007603.2-201ENST00000623281 506 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 RAB11FIP1P1-201ENST00000438337 1762 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 AC016526.3-201ENST00000624275 3931 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 CRYZL1-201ENST00000290244 1685 ntTSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC10.28□□□□□ -0.76
SLC1A1P43005 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 ZNF259P1-202ENST00000572422 4912 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SLC1A1P43005 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SLC1A1P43005 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.76
SLC1A1P43005 FCRL1-203ENST00000368176 2596 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
SLC1A1P43005 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC10.27□□□□□ -0.76
SLC1A1P43005 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC10.27□□□□□ -0.76
SLC1A1P43005 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 AP004782.1-201ENST00000623990 3433 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 FTX-215ENST00000638681 9771 ntTSL 5 BASIC10.27□□□□□ -0.77
SLC1A1P43005 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 RNASE1-204ENST00000412779 896 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SLC1A1P43005 AL158207.1-201ENST00000417984 341 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 DDX11L5-201ENST00000421620 654 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 AC234582.1-206ENST00000430312 845 ntTSL 5 BASIC10.27□□□□□ -0.77
SLC1A1P43005 AL590396.1-201ENST00000450208 775 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 CNN2P1-201ENST00000453616 918 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 RN7SL151P-201ENST00000460537 283 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 RN7SL581P-201ENST00000477181 309 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 RPL13P6-201ENST00000488133 626 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 AC091917.3-201ENST00000509496 600 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 TIMM10-203ENST00000525587 486 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
SLC1A1P43005 ELOCP22-201ENST00000529735 334 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 AC110058.1-201ENST00000530389 563 ntTSL 4 BASIC10.27□□□□□ -0.77
SLC1A1P43005 AC122108.1-201ENST00000558419 424 ntTSL 5 BASIC10.27□□□□□ -0.77
SLC1A1P43005 AC130343.1-201ENST00000576540 459 ntTSL 3 BASIC10.27□□□□□ -0.77
SLC1A1P43005 FAM95B1-213ENST00000593047 767 ntTSL 5 BASIC10.27□□□□□ -0.77
SLC1A1P43005 TDGF1P7-201ENST00000593394 559 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 ZNF429-206ENST00000597078 1043 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC10.27□□□□□ -0.77
SLC1A1P43005 AC093390.2-202ENST00000638236 976 ntTSL 5 BASIC10.27□□□□□ -0.77
SLC1A1P43005 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC10.27□□□□□ -0.77
SLC1A1P43005 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SLC1A1P43005 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC10.27□□□□□ -0.77
SLC1A1P43005 SSX6-202ENST00000412590 1461 ntTSL 2 BASIC10.27□□□□□ -0.77
SLC1A1P43005 AL122035.2-201ENST00000609125 1870 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 ZNF396-204ENST00000586687 1320 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SLC1A1P43005 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC10.27□□□□□ -0.77
SLC1A1P43005 PNPT1P1-201ENST00000450418 2315 ntBASIC10.27□□□□□ -0.77
SLC1A1P43005 FKBP4P7-201ENST00000433874 1363 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms