Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 SNX19P1-201ENST00000444901 2981 ntBASIC10.34□□□□□ -0.75
SLC1A1P43005 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC10.34□□□□□ -0.75
SLC1A1P43005 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SLC1A1P43005 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
SLC1A1P43005 ATP8B5P-202ENST00000423138 2157 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 ZNF433-201ENST00000344980 2280 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 DERA-204ENST00000526530 1619 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 MIR4435-2HG-202ENST00000371162 2044 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 ERICH6B-201ENST00000298738 2421 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 PRM1-201ENST00000312511 424 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 KITLG-203ENST00000357116 565 ntTSL 4 BASIC10.33□□□□□ -0.76
SLC1A1P43005 FCER1G-202ENST00000367992 551 ntTSL 3 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC064847.1-201ENST00000403125 506 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 AC119677.1-201ENST00000414199 471 ntTSL 3 BASIC10.33□□□□□ -0.76
SLC1A1P43005 CRYZP1-201ENST00000428923 947 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC093326.1-201ENST00000444079 762 ntTSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 SPAG11A-206ENST00000454911 521 ntTSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC139713.1-201ENST00000515019 321 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC10.33□□□□□ -0.76
SLC1A1P43005 OR1D4-202ENST00000531680 642 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 AC096996.2-201ENST00000563906 426 ntTSL 3 BASIC10.33□□□□□ -0.76
SLC1A1P43005 MIR3190-201ENST00000577414 80 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC245748.1-201ENST00000588212 561 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 AC063977.4-201ENST00000595913 872 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 FXYD3-213ENST00000605552 837 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 HNRNPCL3-201ENST00000617807 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 NOL8-201ENST00000358855 4422 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 TRIM16-211ENST00000577886 1979 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SLC1A1P43005 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SLC1A1P43005 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 GSN-AS1-201ENST00000414544 4763 ntBASIC10.33□□□□□ -0.76
SLC1A1P43005 TRPS1-211ENST00000520276 4083 ntTSL 2 BASIC10.33□□□□□ -0.76
SLC1A1P43005 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SLC1A1P43005 ASTN1-204ENST00000424564 3685 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 SLAMF7-204ENST00000441662 2497 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 AC022762.2-201ENST00000600308 1353 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 SLC25A14-203ENST00000361980 969 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 C20orf173-202ENST00000374345 985 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 AL513475.2-201ENST00000402316 392 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 AL512353.1-201ENST00000414798 514 ntTSL 3 BASIC10.32□□□□□ -0.76
SLC1A1P43005 OR11M1P-201ENST00000415975 895 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 AL139327.3-201ENST00000433721 379 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 MID1IP1-AS1-201ENST00000436893 376 ntTSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 AL445493.2-201ENST00000442684 945 ntTSL 3 BASIC10.32□□□□□ -0.76
SLC1A1P43005 SEPHS1P6-201ENST00000443084 1179 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 RN7SL461P-201ENST00000484915 282 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
SLC1A1P43005 LINC00524-201ENST00000556987 418 ntTSL 3 BASIC10.32□□□□□ -0.76
SLC1A1P43005 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 AC011473.3-201ENST00000594910 485 ntTSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 ITGB2-AS1-205ENST00000609694 555 ntTSL 4 BASIC10.32□□□□□ -0.76
SLC1A1P43005 AC024580.2-201ENST00000623363 231 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 AC022784.8-201ENST00000623764 559 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 AC096920.2-201ENST00000624711 339 ntTSL 4 BASIC10.32□□□□□ -0.76
SLC1A1P43005 AC005906.2-209ENST00000639919 1244 ntTSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 SERPINB11-201ENST00000382749 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 FP325330.3-201ENST00000623760 9537 ntBASIC10.32□□□□□ -0.76
SLC1A1P43005 CRYZL1-204ENST00000381554 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms