Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCDC162P-207ENST00000473454 547 ntTSL 4 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LGI1-204ENST00000478763 600 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC097518.1-201ENST00000512516 421 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 DERL1-205ENST00000523036 542 ntTSL 4 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 OR7E11P-201ENST00000532901 952 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LIPM-202ENST00000539337 1197 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC087311.1-201ENST00000553060 1233 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ETFRF1-203ENST00000554266 429 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 RNASE12-201ENST00000556526 631 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC109631.1-201ENST00000559695 781 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 CMC2-207ENST00000564174 424 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC005670.1-201ENST00000572349 395 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC015688.7-201ENST00000580276 664 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ORMDL3-208ENST00000584220 414 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC103809.1-201ENST00000585167 651 ntTSL 3 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC016590.1-202ENST00000586324 525 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LINC01440-203ENST00000596828 1005 ntTSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC069503.1-202ENST00000616576 642 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC093495.1-214ENST00000627116 559 ntTSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ELF5-205ENST00000532417 2330 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AGBL2-203ENST00000525123 3577 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 OLFML1-203ENST00000528758 1438 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AP001020.2-201ENST00000581712 1605 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 MMP19-201ENST00000322569 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 LRRC15-202ENST00000428839 3248 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SRGAP2-215ENST00000605610 3212 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 RMI1-201ENST00000325875 3420 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 EGFLAM-203ENST00000354891 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 CXXC4-AS1-201ENST00000500179 2968 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 FAM71C-201ENST00000324341 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SALL2-206ENST00000613414 1566 ntTSL 2 BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AL160408.1-201ENST00000417805 1373 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 SUCLA2P3-201ENST00000458157 1357 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AC092964.1-201ENST00000623304 1399 ntBASIC9.12□□□□□ -0.95
NPIPA3F8WFD2 AL121895.1-202ENST00000441208 2701 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 EPS15L1-203ENST00000535753 2666 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 DYRK1A-204ENST00000398960 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 LILRB1-205ENST00000396331 2960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SFTPA1-201ENST00000398636 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 LYZL4-201ENST00000287748 904 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 OR1N1-201ENST00000304880 936 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 KRTAP8-1-201ENST00000329621 556 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 TMIGD3-202ENST00000369717 1150 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AL596223.2-201ENST00000413220 434 ntTSL 3 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 DEPDC4-203ENST00000416321 1155 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 APCDD1L-AS1-202ENST00000424205 581 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 RBMY2WP-201ENST00000424230 894 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AL139142.1-201ENST00000431459 677 ntTSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 RBMY2XP-201ENST00000447471 895 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 RPL12P36-201ENST00000470623 478 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 RPS10P5-201ENST00000492704 531 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 CTNNA2-214ENST00000496558 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC021915.2-201ENST00000520496 635 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 KCTD21-AS1-202ENST00000523626 555 ntTSL 4 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 NANOGP1-201ENST00000525030 915 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 NANOG-202ENST00000526286 870 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 NANOGP8-201ENST00000528386 918 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 NANOGP7-201ENST00000554450 918 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 LINC01579-206ENST00000556928 657 ntTSL 3 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC005324.1-203ENST00000580194 541 ntTSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC008555.4-201ENST00000605481 568 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AL139098.2-201ENST00000608233 381 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC244472.3-201ENST00000611520 428 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 Metazoa_SRP.61-201ENST00000613464 315 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC005703.5-201ENST00000623654 555 ntBASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 NANOGP8-202ENST00000629403 870 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 AC027369.1-201ENST00000640698 1105 ntTSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 STPG1-202ENST00000337248 2715 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SMLR1-201ENST00000541421 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 PHACTR3-209ENST00000541461 2349 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SERPINB10-201ENST00000238508 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 SRP54-208ENST00000555557 1949 ntTSL 2 BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NPIPA3F8WFD2 FAM189A2-203ENST00000377216 1385 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 378.3 ms