Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 AC010141.2-201ENST00000452426 721 ntBASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 AC104187.1-201ENST00000607510 612 ntBASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CYP46A1Q9Y6A2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 LINC01521-201ENST00000504184 1943 ntBASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 CCDC92B-201ENST00000575506 885 ntBASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 KRT16P2-201ENST00000414673 1423 ntBASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.61■■□□□ 1.53
CYP46A1Q9Y6A2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CYP46A1Q9Y6A2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 LINC01006-201ENST00000333319 2292 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 KRT18P14-201ENST00000534205 1250 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L2-201ENST00000561772 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 AC120498.10-201ENST00000621827 505 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L6-201ENST00000626483 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L1-201ENST00000627662 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L8-201ENST00000629013 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L3-201ENST00000630187 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L7-201ENST00000630678 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 DUX4L5-201ENST00000630834 1275 ntBASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.59■■□□□ 1.53
CYP46A1Q9Y6A2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 AC011484.1-201ENST00000377652 1995 ntBASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 AP001160.3-201ENST00000601484 763 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms