Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC138907.5-202ENST00000569484 235 ntBASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 TERF1P2-201ENST00000583350 1212 ntBASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA11Q9Y5H2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 AC061975.6-201ENST00000579045 1553 ntBASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA11Q9Y5H2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA11Q9Y5H2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA11Q9Y5H2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA11Q9Y5H2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA11Q9Y5H2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PCDHGA11Q9Y5H2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDHGA11Q9Y5H2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 CCDC92B-201ENST00000575506 885 ntBASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA11Q9Y5H2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms