Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA4Q9Y5G9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.42■□□□□ 0.86
PCDHGA4Q9Y5G9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA4Q9Y5G9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA4Q9Y5G9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGA4Q9Y5G9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGA4Q9Y5G9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 AL050303.2-201ENST00000619798 666 ntBASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA4Q9Y5G9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA4Q9Y5G9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.39■□□□□ 0.86
PCDHGA4Q9Y5G9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA4Q9Y5G9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA4Q9Y5G9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA4Q9Y5G9 AC003102.1-202ENST00000563394 1796 ntBASIC20.39■□□□□ 0.86
PCDHGA4Q9Y5G9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA4Q9Y5G9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 TSPY6P-201ENST00000448518 926 ntBASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 AC083906.2-201ENST00000511578 360 ntBASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGA4Q9Y5G9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 KRT18P6-201ENST00000555540 1265 ntBASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA4Q9Y5G9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 AC010542.4-201ENST00000563151 1910 ntBASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms