Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 KRT18P5-201ENST00000436075 1291 ntBASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGB3Q9Y5G1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 AL049796.1-201ENST00000565336 1766 ntBASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 KRT18P14-201ENST00000534205 1250 ntBASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB3Q9Y5G1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGB3Q9Y5G1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 LINC01006-201ENST00000333319 2292 ntBASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGB3Q9Y5G1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 AC022517.1-201ENST00000592429 346 ntBASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB3Q9Y5G1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms