Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 NCF1B-203ENST00000435988 1254 ntBASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 AP001160.3-201ENST00000601484 763 ntBASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB3Q9Y5E6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 AP006587.3-201ENST00000525742 1516 ntBASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 GPX1P1-201ENST00000388829 606 ntBASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB3Q9Y5E6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 MIR663A-201ENST00000385250 93 ntBASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 AC138907.5-202ENST00000569484 235 ntBASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB3Q9Y5E6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 MFSD11-216ENST00000590393 1141 ntBASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 LINC01521-201ENST00000504184 1943 ntBASIC20.27■□□□□ 0.84
PCDHB3Q9Y5E6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB3Q9Y5E6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB3Q9Y5E6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.83
PCDHB3Q9Y5E6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB3Q9Y5E6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 AC010141.2-201ENST00000452426 721 ntBASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 KRT18P20-201ENST00000548986 1279 ntBASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 UBE2DNL-204ENST00000602536 740 ntBASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB3Q9Y5E6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB3Q9Y5E6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms