Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LSM4Q9Y4Z0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 AC006128.1-201ENST00000624704 1661 ntBASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 MIR6084-201ENST00000622012 110 ntBASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LSM4Q9Y4Z0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 AC004911.1-201ENST00000416316 871 ntBASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 CCDC92B-201ENST00000575506 885 ntBASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 AP004607.7-201ENST00000527152 1677 ntBASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSM4Q9Y4Z0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LSM4Q9Y4Z0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LSM4Q9Y4Z0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSM4Q9Y4Z0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 AC073314.1-201ENST00000568729 2216 ntBASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSM4Q9Y4Z0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 NTF6G-201ENST00000591094 616 ntBASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms