Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 AC121338.2-201ENST00000622535 1744 ntBASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 AC007225.1-201ENST00000566331 1836 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 AC010141.3-201ENST00000456659 717 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 pRNA.6-201ENST00000610482 90 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 pRNA.5-201ENST00000612139 90 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 pRNA.11-201ENST00000618423 90 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 pRNA.13-201ENST00000619112 90 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 AC241377.3-202ENST00000626088 1088 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 AC241585.3-202ENST00000628937 1088 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 AC245100.8-202ENST00000629247 1058 ntBASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RCL1Q9Y2P8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.96■□□□□ 0.3
RCL1Q9Y2P8 AL020996.1-203ENST00000536896 2307 ntBASIC16.96■□□□□ 0.3
RCL1Q9Y2P8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
RCL1Q9Y2P8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RCL1Q9Y2P8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 AC138932.1-201ENST00000534164 6830 ntBASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 AP004607.7-201ENST00000527152 1677 ntBASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.95■□□□□ 0.3
RCL1Q9Y2P8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 AC006455.2-201ENST00000429931 906 ntBASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCL1Q9Y2P8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 AL162377.1-201ENST00000618844 1793 ntBASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RCL1Q9Y2P8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms