Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 TERF1P5-201ENST00000477545 1207 ntBASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 AC013268.1-206ENST00000638368 961 ntBASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 AC112229.1-201ENST00000639295 961 ntBASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RPUSD1Q9UJJ7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.27■□□□□ 0.35
RPUSD1Q9UJJ7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RPUSD1Q9UJJ7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
RPUSD1Q9UJJ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 AC007322.1-201ENST00000426983 750 ntBASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.26■□□□□ 0.35
RPUSD1Q9UJJ7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 RBM17P2-201ENST00000616397 1405 ntBASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 AC005229.4-201ENST00000610085 2198 ntBASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPUSD1Q9UJJ7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 AF106564.1-201ENST00000607058 2553 ntBASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 CNN2P6-201ENST00000439038 900 ntBASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 AC245052.3-201ENST00000450182 901 ntBASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 AC243732.1-201ENST00000612648 864 ntBASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPUSD1Q9UJJ7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 AC007322.4-201ENST00000509611 723 ntBASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.23■□□□□ 0.35
RPUSD1Q9UJJ7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms