Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC012306.2-201ENST00000609350 630 ntBASIC20.71■□□□□ 0.91
NCDNQ9UBB6 AL590326.2-201ENST00000625139 305 ntBASIC20.71■□□□□ 0.91
NCDNQ9UBB6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
NCDNQ9UBB6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCDNQ9UBB6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NCDNQ9UBB6 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
NCDNQ9UBB6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NCDNQ9UBB6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.7■□□□□ 0.91
NCDNQ9UBB6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCDNQ9UBB6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.69■□□□□ 0.9
NCDNQ9UBB6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.69■□□□□ 0.9
NCDNQ9UBB6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCDNQ9UBB6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.67■□□□□ 0.9
NCDNQ9UBB6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 AL355075.4-201ENST00000554988 638 ntBASIC20.67■□□□□ 0.9
NCDNQ9UBB6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCDNQ9UBB6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 AC239809.2-201ENST00000415381 517 ntBASIC20.66■□□□□ 0.9
NCDNQ9UBB6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCDNQ9UBB6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.65■□□□□ 0.9
NCDNQ9UBB6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms