Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.1■□□□□ 0.65
LRFN1Q9P244 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRFN1Q9P244 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRFN1Q9P244 AC092118.2-201ENST00000613495 667 ntBASIC19.09■□□□□ 0.65
LRFN1Q9P244 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRFN1Q9P244 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN1Q9P244 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LRFN1Q9P244 ECEL1P1-201ENST00000373592 1742 ntBASIC19.08■□□□□ 0.65
LRFN1Q9P244 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN1Q9P244 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN1Q9P244 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN1Q9P244 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.08■□□□□ 0.65
LRFN1Q9P244 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN1Q9P244 ABHD17AP1-201ENST00000358206 933 ntBASIC19.08■□□□□ 0.64
LRFN1Q9P244 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.08■□□□□ 0.64
LRFN1Q9P244 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.08■□□□□ 0.64
LRFN1Q9P244 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.08■□□□□ 0.64
LRFN1Q9P244 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.08■□□□□ 0.64
LRFN1Q9P244 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN1Q9P244 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN1Q9P244 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN1Q9P244 AC079834.2-201ENST00000609776 1949 ntBASIC19.08■□□□□ 0.64
LRFN1Q9P244 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.08■□□□□ 0.64
LRFN1Q9P244 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN1Q9P244 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.07■□□□□ 0.64
LRFN1Q9P244 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 FAM21FP-204ENST00000608637 956 ntBASIC19.07■□□□□ 0.64
LRFN1Q9P244 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LRFN1Q9P244 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN1Q9P244 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN1Q9P244 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LRFN1Q9P244 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 TSPY20P-201ENST00000450910 630 ntBASIC19.05■□□□□ 0.64
LRFN1Q9P244 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN1Q9P244 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
LRFN1Q9P244 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms