Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 KRT18P11-201ENST00000435214 1283 ntBASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.69■□□□□ 0.74
KCMF1Q9P0J7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 AC016769.1-201ENST00000409132 1010 ntBASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 RBM17P2-201ENST00000616397 1405 ntBASIC19.68■□□□□ 0.74
KCMF1Q9P0J7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.67■□□□□ 0.74
KCMF1Q9P0J7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 AC243732.1-201ENST00000612648 864 ntBASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCMF1Q9P0J7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 AC245052.3-201ENST00000450182 901 ntBASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 MFSD11-216ENST00000590393 1141 ntBASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
KCMF1Q9P0J7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
KCMF1Q9P0J7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
KCMF1Q9P0J7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.64■□□□□ 0.74
KCMF1Q9P0J7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 AC010536.3-201ENST00000620306 533 ntBASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KCMF1Q9P0J7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms