Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 AL023875.1-201ENST00000640777 796 ntBASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.95■■□□□ 1.43
ZFYVE28Q9HCC9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
ZFYVE28Q9HCC9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZFYVE28Q9HCC9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 AC097493.4-201ENST00000641197 219 ntBASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 CYP21A1P-202ENST00000354927 1481 ntBASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZFYVE28Q9HCC9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 AC239809.2-201ENST00000415381 517 ntBASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 AC105020.6-201ENST00000621523 1217 ntBASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.93■■□□□ 1.42
ZFYVE28Q9HCC9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 RCN1P1-201ENST00000400413 996 ntBASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 TSPY15P-201ENST00000457163 923 ntBASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 AC110285.5-201ENST00000611501 352 ntBASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.92■■□□□ 1.42
ZFYVE28Q9HCC9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZFYVE28Q9HCC9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 AC012306.2-201ENST00000609350 630 ntBASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 AC113410.3-201ENST00000623366 203 ntBASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ZFYVE28Q9HCC9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms