Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLK4Q9HAZ1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.12■□□□□ 0.81
CLK4Q9HAZ1 Z98882.1-201ENST00000622160 2253 ntBASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 AF106564.1-201ENST00000607058 2553 ntBASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 NTF6G-201ENST00000591094 616 ntBASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 AC053503.5-201ENST00000601508 636 ntBASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK4Q9HAZ1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 EEF1DP3-203ENST00000566025 782 ntBASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 AP004607.4-201ENST00000530158 1459 ntBASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 LINC01006-201ENST00000333319 2292 ntBASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK4Q9HAZ1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 AL391422.3-201ENST00000603791 2761 ntBASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 KRT19P1-201ENST00000405746 1186 ntBASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.09■□□□□ 0.81
CLK4Q9HAZ1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms