Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BRD9Q9H8M2 AC092053.2-201ENST00000640557 1818 ntBASIC21.52■■□□□ 1.04
BRD9Q9H8M2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.52■■□□□ 1.03
BRD9Q9H8M2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
BRD9Q9H8M2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
BRD9Q9H8M2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 AC242852.2-201ENST00000615738 1807 ntBASIC21.51■■□□□ 1.03
BRD9Q9H8M2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRD9Q9H8M2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 AC060766.5-201ENST00000590539 871 ntBASIC21.5■■□□□ 1.03
BRD9Q9H8M2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.5■■□□□ 1.03
BRD9Q9H8M2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 AL589743.5-201ENST00000616611 1050 ntBASIC21.49■■□□□ 1.03
BRD9Q9H8M2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRD9Q9H8M2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 HLA-B-256ENST00000639848 1089 ntBASIC21.48■■□□□ 1.03
BRD9Q9H8M2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
BRD9Q9H8M2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 UBE2SP1-201ENST00000450587 669 ntBASIC21.47■■□□□ 1.03
BRD9Q9H8M2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
BRD9Q9H8M2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD9Q9H8M2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD9Q9H8M2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD9Q9H8M2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRD9Q9H8M2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD9Q9H8M2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRD9Q9H8M2 MCRIP2P1-201ENST00000394346 511 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms