Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 KRT18P20-201ENST00000548986 1279 ntBASIC19.24■□□□□ 0.67
UBQLN3Q9H347 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 UBE2DNL-204ENST00000602536 740 ntBASIC19.24■□□□□ 0.67
UBQLN3Q9H347 RAP2CP1-201ENST00000605103 478 ntBASIC19.24■□□□□ 0.67
UBQLN3Q9H347 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN3Q9H347 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 CDCA4P2-201ENST00000441182 718 ntBASIC19.22■□□□□ 0.67
UBQLN3Q9H347 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 MFSD11-216ENST00000590393 1141 ntBASIC19.22■□□□□ 0.67
UBQLN3Q9H347 AC011767.1-201ENST00000617410 1153 ntBASIC19.22■□□□□ 0.67
UBQLN3Q9H347 AC073111.5-205ENST00000641717 521 ntBASIC19.22■□□□□ 0.67
UBQLN3Q9H347 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN3Q9H347 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 MYCNOS-205ENST00000641950 531 ntBASIC19.21■□□□□ 0.67
UBQLN3Q9H347 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.21■□□□□ 0.67
UBQLN3Q9H347 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN3Q9H347 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN3Q9H347 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms