Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
KRTAP4-3Q9BYR4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC7.09□□□□□ -1.28
KRTAP4-3Q9BYR4 AC010980.2-201ENST00000587099 1412 ntBASIC7.09□□□□□ -1.28
KRTAP4-3Q9BYR4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
KRTAP4-3Q9BYR4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
KRTAP4-3Q9BYR4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
KRTAP4-3Q9BYR4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 POU5F1P4-201ENST00000413175 1085 ntBASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 AC008687.6-201ENST00000596318 630 ntBASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 LINC00565-201ENST00000562710 2331 ntBASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 KRT16P2-201ENST00000414673 1423 ntBASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 WWC2-AS2-201ENST00000578387 2183 ntBASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC7.08□□□□□ -1.28
KRTAP4-3Q9BYR4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
KRTAP4-3Q9BYR4 DUSP5P2-201ENST00000426873 1033 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms