Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCM2Q9BSQ5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 AL049796.1-201ENST00000565336 1766 ntBASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 DUX4L16-201ENST00000555130 1264 ntBASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCM2Q9BSQ5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.45■□□□□ 0.86
CCM2Q9BSQ5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 AC231657.2-201ENST00000624556 255 ntBASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2Q9BSQ5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 AC073111.5-205ENST00000641717 521 ntBASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2Q9BSQ5 AF106564.1-201ENST00000607058 2553 ntBASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms