Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CD177P1-201ENST00000606252 935 ntBASIC17.56■□□□□ 0.4
FOXC2Q99958 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXC2Q99958 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
FOXC2Q99958 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXC2Q99958 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXC2Q99958 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXC2Q99958 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
FOXC2Q99958 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FOXC2Q99958 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FOXC2Q99958 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FOXC2Q99958 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 TMPOP1-202ENST00000424642 1267 ntBASIC17.55■□□□□ 0.4
FOXC2Q99958 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXC2Q99958 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
FOXC2Q99958 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
FOXC2Q99958 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
FOXC2Q99958 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXC2Q99958 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXC2Q99958 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXC2Q99958 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FOXC2Q99958 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXC2Q99958 AC133561.1-201ENST00000568600 2415 ntBASIC17.55■□□□□ 0.4
FOXC2Q99958 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.54■□□□□ 0.4
FOXC2Q99958 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXC2Q99958 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.54■□□□□ 0.4
FOXC2Q99958 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FOXC2Q99958 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FOXC2Q99958 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXC2Q99958 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXC2Q99958 AC004812.2-201ENST00000611079 2094 ntBASIC17.54■□□□□ 0.4
FOXC2Q99958 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
FOXC2Q99958 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
FOXC2Q99958 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FOXC2Q99958 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FOXC2Q99958 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXC2Q99958 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 ARMC10P1-201ENST00000313754 855 ntBASIC17.53■□□□□ 0.4
FOXC2Q99958 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
FOXC2Q99958 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXC2Q99958 KRT18P35-201ENST00000510488 1269 ntBASIC17.53■□□□□ 0.4
FOXC2Q99958 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.53■□□□□ 0.4
FOXC2Q99958 AC124016.1-201ENST00000609552 612 ntBASIC17.53■□□□□ 0.4
FOXC2Q99958 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXC2Q99958 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FOXC2Q99958 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXC2Q99958 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FOXC2Q99958 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXC2Q99958 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXC2Q99958 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FOXC2Q99958 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
FOXC2Q99958 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.52■□□□□ 0.4
FOXC2Q99958 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
FOXC2Q99958 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FOXC2Q99958 MTDHP1-201ENST00000605323 784 ntBASIC17.52■□□□□ 0.4
FOXC2Q99958 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXC2Q99958 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXC2Q99958 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXC2Q99958 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.52■□□□□ 0.39
FOXC2Q99958 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms