Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS1Q99742 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.93■□□□□ 0.62
NPAS1Q99742 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS1Q99742 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS1Q99742 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.93■□□□□ 0.62
NPAS1Q99742 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.93■□□□□ 0.62
NPAS1Q99742 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.93■□□□□ 0.62
NPAS1Q99742 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS1Q99742 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPAS1Q99742 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPAS1Q99742 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.92■□□□□ 0.62
NPAS1Q99742 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.92■□□□□ 0.62
NPAS1Q99742 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.92■□□□□ 0.62
NPAS1Q99742 RARRES2P11-201ENST00000635158 484 ntBASIC18.92■□□□□ 0.62
NPAS1Q99742 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS1Q99742 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS1Q99742 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NPAS1Q99742 KRT16P2-201ENST00000414673 1423 ntBASIC18.91■□□□□ 0.62
NPAS1Q99742 AC092667.1-201ENST00000434301 2586 ntBASIC18.91■□□□□ 0.62
NPAS1Q99742 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS1Q99742 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS1Q99742 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NPAS1Q99742 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.91■□□□□ 0.62
NPAS1Q99742 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS1Q99742 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.91■□□□□ 0.62
NPAS1Q99742 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.91■□□□□ 0.62
NPAS1Q99742 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS1Q99742 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NPAS1Q99742 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS1Q99742 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
NPAS1Q99742 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NPAS1Q99742 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NPAS1Q99742 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NPAS1Q99742 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.9■□□□□ 0.62
NPAS1Q99742 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS1Q99742 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS1Q99742 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NPAS1Q99742 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
NPAS1Q99742 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS1Q99742 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NPAS1Q99742 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
NPAS1Q99742 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS1Q99742 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS1Q99742 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS1Q99742 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.89■□□□□ 0.61
NPAS1Q99742 DUX4L16-201ENST00000555130 1264 ntBASIC18.89■□□□□ 0.61
NPAS1Q99742 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS1Q99742 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS1Q99742 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.89■□□□□ 0.61
NPAS1Q99742 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
NPAS1Q99742 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.89■□□□□ 0.61
NPAS1Q99742 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.89■□□□□ 0.61
NPAS1Q99742 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS1Q99742 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS1Q99742 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.88■□□□□ 0.61
NPAS1Q99742 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
NPAS1Q99742 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPAS1Q99742 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.88■□□□□ 0.61
NPAS1Q99742 SLC7A5P1-201ENST00000568957 537 ntBASIC18.88■□□□□ 0.61
NPAS1Q99742 BID-214ENST00000617586 542 ntTSL 5 BASIC18.88■□□□□ 0.61
NPAS1Q99742 AC010536.3-201ENST00000620306 533 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms