Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 KRT18P60-201ENST00000312876 1297 ntBASIC19.56■□□□□ 0.72
NR1H4Q96RI1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NR1H4Q96RI1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 NEFHP1-201ENST00000412845 2629 ntBASIC19.55■□□□□ 0.72
NR1H4Q96RI1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H4Q96RI1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 DUX4L18-201ENST00000553347 1267 ntBASIC19.54■□□□□ 0.72
NR1H4Q96RI1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H4Q96RI1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H4Q96RI1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 LONRF2P2-201ENST00000439212 571 ntBASIC19.52■□□□□ 0.72
NR1H4Q96RI1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NR1H4Q96RI1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
NR1H4Q96RI1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NR1H4Q96RI1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms