Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AC004911.1-201ENST00000416316 871 ntBASIC17.31■□□□□ 0.36
GAFA1Q96PS6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 TERF1P5-201ENST00000477545 1207 ntBASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AL137784.2-201ENST00000607332 1000 ntBASIC17.31■□□□□ 0.36
GAFA1Q96PS6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.3■□□□□ 0.36
GAFA1Q96PS6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 DUX4L16-201ENST00000555130 1264 ntBASIC17.3■□□□□ 0.36
GAFA1Q96PS6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAFA1Q96PS6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 AC091799.1-201ENST00000422823 811 ntBASIC17.29■□□□□ 0.36
GAFA1Q96PS6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GAFA1Q96PS6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 PKD1P6-201ENST00000343738 4769 ntBASIC17.28■□□□□ 0.36
GAFA1Q96PS6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 AC092666.2-201ENST00000613287 246 ntBASIC17.28■□□□□ 0.36
GAFA1Q96PS6 AC013268.1-206ENST00000638368 961 ntBASIC17.28■□□□□ 0.36
GAFA1Q96PS6 AC112229.1-201ENST00000639295 961 ntBASIC17.28■□□□□ 0.36
GAFA1Q96PS6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAFA1Q96PS6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms