Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AP005435.1-201ENST00000529293 1178 ntBASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 AL356740.2-201ENST00000601559 647 ntBASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.58■□□□□ 0.73
NSMCE2Q96MF7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 KRT16P3-201ENST00000439127 1283 ntBASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NSMCE2Q96MF7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NSMCE2Q96MF7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.56■□□□□ 0.72
NSMCE2Q96MF7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 RNF165-205ENST00000588679 2904 ntBASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NSMCE2Q96MF7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms